GenePublisher: automated analysis of DNA microarray data

GenePublisher: automated analysis of DNA microarray data

GenePublisher, a system for automatic analysis of data from DNA microarray experiments, has been implemented with a web interface at http://www.cbs.dtu.dk/services/GenePublisher. Raw data are uploaded to the server together with a specification of the data. The server performs normalization, statistical analysis and visualization of the data. The results are run against databases of signal tran...

A Review of DNA Microarray Data Analysis

Analysis of DNA microarray expression data.

DNA microarrays are powerful tools for studying biological mechanisms and for developing prognostic and predictive classifiers for identifying the patients who require treatment and are best candidates for specific treatments. Because microarrays produce so much data from each specimen, they offer great opportunities for discovery and great dangers or producing misleading claims. Microarray bas...

A Review of DNA Microarray Data Analysis

Background: The mystery of life for a living organism resides in the function of thousands of genes and their products. The striking question of how to get the whole system of an organism in one picture, has been pondering for years. Traditional methods work on one gene at a time, which is time consuming and costly. The ingenuous idea of DNA microarrays created a solution to this problem. DNA m...

Automated high-throughput probe production for DNA microarray analysis.

DNA microarrays have become an established tool for gene expression profiling. Construction of these microarrays using immobilized cDNAs is a common experimental strategy. However, this is extremely laborious, requiring the preparation of hundreds or thousands of cDNA probes. To minimize this initial bottleneck, we developed a comprehensive high-throughput robotic system to prepare DNA probes s...